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Subspace clustering algorithms are used for understanding the cluster structure that explains the patterns prevalent in the dataset well. These methods are extensively used for data-exploration tasks in various areas of Natural Sciences. However, most of these methods fail to handle confounding attributes in the dataset. For datasets where a data sample represent multiple attributes, naively applying any clustering approach can result in undesired output. To this end, we propose a novel framework for jointly removing confounding attributes while learning to cluster data points in individual subspaces. Assuming we have label information about these confounding attributes, we regularize the clustering method by adversarially learning to minimize the mutual information between the data representation and the confounding attribute labels. Our experimental result on synthetic and real-world datasets demonstrate the effectiveness of our approach. 

Converging evidence in human and animal models suggests that exogenous stimulation of the motor cortex (M1) elicits responses in the hand with similar modular structure to that found during voluntary grasping movements. The aim of this study was to establish the extent to which modularity in muscle responses to transcranial magnetic stimulation (TMS) to M1 resembles modularity in muscle activation during voluntary hand movements involving finger fractionation. EMG was recorded from eight hand-forearm muscles in nine healthy individuals. Modularity was defined using non-negative matrix factorization to identify low rank approximations (spatial muscle synergies) of the complex activation patterns of EMG data recorded during high density TMS mapping of M1 and voluntary formation of gestures in the American Sign Language alphabet. Analysis of synergies as a set, and individually, revealed greater than chance similarity between those derived from TMS and those derived from voluntary movement. Both datasets included synergies dominated by single intrinsic hand muscles presumably to meet the demand for highly fractionated finger movement. These results suggest a cortical role in combining corticospinal connectivity to individual intrinsic hand muscles with modular mulit-muscle activation via synergies. 

Using medical images to evaluate disease severity and change over time is a routine and important task in clinical decision making. Grading systems are often used, but are unreliable as domain experts disagree on disease severity category thresholds. These discrete categories also do not reflect the underlying continuous spectrum of disease severity. To address these issues, we developed a convolutional Siamese neural network approach to evaluate disease severity at single time points and change between longitudinal patient visits on a continuous spectrum. We demonstrate this in two medical imaging domains: retinopathy of prematurity (ROP) in retinal photographs and osteoarthritis in knee radiographs. Our patient cohorts consist of 4861 images from 870 patients in the Imaging and Informatics in Retinopathy of Prematurity (i-ROP) cohort study and 10,012 images from 3021 patients in the Multicenter Osteoarthritis Study (MOST), both of which feature longitudinal imaging data. Multiple expert clinician raters ranked 100 retinal images and 100 knee radiographs from excluded test sets for severity of ROP and osteoarthritis, respectively. The Siamese neural network output for each image in comparison to a pool of normal reference images correlates with disease severity rank (ρ = 0.87 for ROP andρ = 0.89 for osteoarthritis), both within and between the clinical grading categories. Thus, this output can represent the continuous spectrum of disease severity at any single time point. The difference in these outputs can be used to show change over time. Alternatively, paired images from the same patient at two time points can be directly compared using the Siamese neural network, resulting in an additional continuous measure of change between images. Importantly, our approach does not require manual localization of the pathology of interest and requires only a binary label for training (same versus different). The location of disease and site of change detected by the algorithm can be visualized using an occlusion sensitivity map-based approach. For a longitudinal binary change detection task, our Siamese neural networks achieve test set receiving operator characteristic area under the curves (AUCs) of up to 0.90 in evaluating ROP or knee osteoarthritis change, depending on the change detection strategy. The overall performance on this binary task is similar compared to a conventional convolutional deep-neural network trained for multi-class classification. Our results demonstrate that convolutional Siamese neural networks can be a powerful tool for evaluating the continuous spectrum of disease severity and change in medical imaging.